Obtain paths to populations/nodes/gates in a flowjo workspace — wsx_get_poppaths • fcexpr

Obtain paths to populations/nodes/gates in a flowjo workspace

wsx_get_poppaths(ws, groups = NULL, collapse = T)

Arguments

ws: path to flowjo workspace or a parsed xml-document (xml2::read_xml(ws))
groups: which groups in the workspace to consider
collapse: logical whether to collapse FileNames to a list column

Value

data frame

Examples

if (FALSE) {
pp <- wsx_get_poppaths(ws, collapse = F)
# check which files have equal gating trees
# and get the node (or path, or population) names
pp <- pp %>%
dplyr::group_by(PopulationFullPath, Population, ws) %>%
dplyr::summarise(FileName = list(FileName), .groups = "drop")
}